10#include "CoordinateElement.h"
12#include "FiniteElement.h"
13#include "FunctionSpace.h"
15#include <basix/mdspan.hpp>
17#include <dolfinx/common/IndexMap.h>
18#include <dolfinx/common/types.h>
19#include <dolfinx/geometry/utils.h>
20#include <dolfinx/mesh/Mesh.h>
30template <dolfinx::scalar T, std::
floating_po
int U>
43template <std::
floating_po
int T>
51 for (std::size_t i = 0; i <
geometry.cmaps().size(); ++i)
53 if (
geometry.cmaps().at(i).cell_shape() == cell_type)
56 throw std::runtime_error(
"Cannot find CoordinateElement for FiniteElement");
58 int index = cmap_index(element.
cell_type());
61 const std::size_t gdim =
geometry.dim();
62 auto x_dofmap =
geometry.dofmaps().at(index);
63 std::span<const T> x_g =
geometry.x();
66 const std::size_t num_dofs_g = cmap.
dim();
72 std::array<std::size_t, 4> phi_shape = cmap.
tabulate_shape(0, Xshape[0]);
74 std::reduce(phi_shape.begin(), phi_shape.end(), 1, std::multiplies{}));
75 md::mdspan<
const T, md::extents<std::size_t, 1, md::dynamic_extent,
76 md::dynamic_extent, 1>>
77 phi_full(phi_b.data(), phi_shape);
79 auto phi = md::submdspan(phi_full, 0, md::full_extent, md::full_extent, 0);
83 std::vector<T> coordinate_dofs(num_dofs_g * gdim, 0);
84 std::vector<T> x(3 * (cells.size() * Xshape[0]), 0);
85 for (
auto cell_it = cells.begin(); cell_it != cells.end(); ++cell_it)
88 auto x_dofs = md::submdspan(x_dofmap, *cell_it, md::full_extent);
89 for (std::size_t i = 0; i < x_dofs.size(); ++i)
91 std::copy_n(std::next(x_g.begin(), 3 * x_dofs[i]), gdim,
92 std::next(coordinate_dofs.begin(), i * gdim));
96 std::size_t offset = std::ranges::distance(cells.begin(), cell_it);
97 for (std::size_t p = 0; p < Xshape[0]; ++p)
99 for (std::size_t j = 0; j < gdim; ++j)
102 for (std::size_t k = 0; k < num_dofs_g; ++k)
103 acc += phi(p, k) * coordinate_dofs[k * gdim + j];
104 x[j * (cells.size() * Xshape[0]) + offset * Xshape[0] + p] = acc;
128template <dolfinx::scalar T, std::
floating_po
int U>
129void interpolate(Function<T, U>& u, std::span<const T> f,
130 std::array<std::size_t, 2> fshape,
136template <
typename T, std::
size_t D>
137using mdspan_t = md::mdspan<T, md::dextents<std::size_t, D>>;
158template <dolfinx::scalar T>
159void scatter_values(MPI_Comm comm, std::span<const std::int32_t> src_ranks,
160 std::span<const std::int32_t> dest_ranks,
161 mdspan_t<const T, 2> send_values, std::span<T> recv_values)
163 const std::size_t block_size = send_values.extent(1);
164 assert(src_ranks.size() * block_size == send_values.size());
165 assert(recv_values.size() == dest_ranks.size() * block_size);
168 std::vector<std::int32_t> out_ranks(src_ranks.size());
169 out_ranks.assign(src_ranks.begin(), src_ranks.end());
170 out_ranks.erase(std::ranges::unique(out_ranks).begin(), out_ranks.end());
171 out_ranks.reserve(out_ranks.size() + 1);
174 std::vector<std::int32_t> in_ranks;
175 in_ranks.reserve(dest_ranks.size());
176 std::copy_if(dest_ranks.begin(), dest_ranks.end(),
177 std::back_inserter(in_ranks),
178 [](
auto rank) { return rank >= 0; });
181 std::ranges::sort(in_ranks);
182 in_ranks.erase(std::ranges::unique(in_ranks).begin(), in_ranks.end());
183 in_ranks.reserve(in_ranks.size() + 1);
186 MPI_Comm reverse_comm;
187 MPI_Dist_graph_create_adjacent(
188 comm, in_ranks.size(), in_ranks.data(), MPI_UNWEIGHTED, out_ranks.size(),
189 out_ranks.data(), MPI_UNWEIGHTED, MPI_INFO_NULL,
false, &reverse_comm);
191 std::vector<std::int32_t> comm_to_output;
192 std::vector<std::int32_t> recv_sizes(in_ranks.size());
193 recv_sizes.reserve(1);
194 std::vector<std::int32_t> recv_offsets(in_ranks.size() + 1, 0);
197 std::vector<std::pair<std::int32_t, std::int32_t>> rank_to_neighbor;
198 rank_to_neighbor.reserve(in_ranks.size());
199 for (std::size_t i = 0; i < in_ranks.size(); i++)
200 rank_to_neighbor.push_back({in_ranks[i], i});
201 std::ranges::sort(rank_to_neighbor);
204 std::ranges::for_each(
206 [&rank_to_neighbor, &recv_sizes, block_size](
auto rank)
210 auto it = std::ranges::lower_bound(rank_to_neighbor, rank,
212 [](
auto e) {
return e.first; });
213 assert(it != rank_to_neighbor.end() and it->first == rank);
214 recv_sizes[it->second] += block_size;
219 std::partial_sum(recv_sizes.begin(), recv_sizes.end(),
220 std::next(recv_offsets.begin(), 1));
223 comm_to_output.resize(recv_offsets.back() / block_size);
224 std::vector<std::int32_t> recv_counter(recv_sizes.size(), 0);
225 for (std::size_t i = 0; i < dest_ranks.size(); ++i)
227 if (
const std::int32_t rank = dest_ranks[i];
rank >= 0)
229 auto it = std::ranges::lower_bound(rank_to_neighbor, rank,
231 [](
auto e) {
return e.first; });
232 assert(it != rank_to_neighbor.end() and it->first == rank);
233 int insert_pos = recv_offsets[it->second] + recv_counter[it->second];
234 comm_to_output[insert_pos / block_size] = i * block_size;
235 recv_counter[it->second] += block_size;
240 std::vector<std::int32_t> send_sizes(out_ranks.size());
241 send_sizes.reserve(1);
246 std::vector<std::pair<std::int32_t, std::int32_t>> rank_to_neighbor;
247 rank_to_neighbor.reserve(out_ranks.size());
248 for (std::size_t i = 0; i < out_ranks.size(); i++)
249 rank_to_neighbor.push_back({out_ranks[i], i});
253 auto start = rank_to_neighbor.begin();
254 std::ranges::for_each(
256 [&rank_to_neighbor, &send_sizes, block_size, &start](
auto rank)
258 auto it = std::ranges::lower_bound(start, rank_to_neighbor.end(),
259 rank, std::ranges::less(),
260 [](
auto e) { return e.first; });
261 assert(it != rank_to_neighbor.end() and it->first == rank);
262 send_sizes[it->second] += block_size;
268 std::vector<std::int32_t> send_offsets(send_sizes.size() + 1, 0);
269 std::partial_sum(send_sizes.begin(), send_sizes.end(),
270 std::next(send_offsets.begin(), 1));
273 std::vector<T> values(recv_offsets.back());
275 MPI_Neighbor_alltoallv(send_values.data_handle(), send_sizes.data(),
277 values.data(), recv_sizes.data(), recv_offsets.data(),
279 MPI_Comm_free(&reverse_comm);
283 std::ranges::fill(recv_values, T{0});
284 for (std::size_t i = 0; i < comm_to_output.size(); i++)
286 auto vals = std::next(recv_values.begin(), comm_to_output[i]);
287 auto vals_from = std::next(values.begin(), i * block_size);
288 std::copy_n(vals_from, block_size, vals);
300template <dolfinx::MDSpanRank2 U, dolfinx::MDSpanRank2 V, dolfinx::scalar T>
301void interpolation_apply(U&& Pi, V&& data, std::span<T> coeffs,
int bs)
305 using X =
typename std::remove_cvref_t<U>::value_type;
310 assert(data.extent(0) * data.extent(1) == Pi.extent(1));
311 for (std::size_t i = 0; i < Pi.extent(0); ++i)
314 for (std::size_t k = 0; k < data.extent(1); ++k)
315 for (std::size_t j = 0; j < data.extent(0); ++j)
317 +=
static_cast<X
>(Pi(i, k * data.extent(0) + j)) * data(j, k);
322 assert(data.extent(0) == Pi.extent(1));
323 assert(
static_cast<int>(data.extent(1)) == bs);
324 std::size_t cols = Pi.extent(1);
325 for (
int k = 0; k < bs; ++k)
327 for (std::size_t i = 0; i < Pi.extent(0); ++i)
330 for (std::size_t j = 0; j < cols; ++j)
331 acc +=
static_cast<X
>(Pi(i, j)) * data(j, k);
332 coeffs[bs * i + k] = acc;
357template <dolfinx::scalar T, std::
floating_po
int U>
358void interpolate_same_map(Function<T, U>& u1, mesh::CellRange
auto&& cells1,
359 const Function<T, U>& u0,
360 mesh::CellRange
auto&& cells0)
362 auto V0 = u0.function_space();
364 auto V1 = u1.function_space();
366 auto mesh0 = V0->mesh();
369 auto mesh1 = V1->mesh();
372 auto element0 = V0->element();
374 auto element1 = V1->element();
377 assert(mesh0->topology()->dim());
378 const int tdim = mesh0->topology()->dim();
379 auto map = mesh0->topology()->index_map(tdim);
381 std::span<T> u1_array = u1.x()->array();
382 std::span<const T> u0_array = u0.x()->array();
384 std::span<const std::uint32_t> cell_info0;
385 std::span<const std::uint32_t> cell_info1;
386 if (element1->needs_dof_transformations()
387 or element0->needs_dof_transformations())
389 mesh0->topology_mutable()->create_cell_permutations();
390 cell_info0 = std::span(mesh0->topology()->get_cell_permutation_info());
391 mesh1->topology_mutable()->create_cell_permutations();
392 cell_info1 = std::span(mesh1->topology()->get_cell_permutation_info());
396 auto dofmap1 = V1->dofmap();
397 auto dofmap0 = V0->dofmap();
400 const int bs1 = dofmap1->bs();
401 const int bs0 = dofmap0->bs();
402 auto apply_dof_transformation = element0->template dof_transformation_fn<T>(
404 auto apply_inverse_dof_transform
405 = element1->template dof_transformation_fn<T>(
409 std::vector<T> local0(element0->space_dimension());
410 std::vector<T> local1(element1->space_dimension());
413 auto [i_m, im_shape] = element1->create_interpolation_operator(*element0);
417 if (cells0.size() != cells1.size())
418 throw std::invalid_argument(
"Length of cells0 and cells1 must match.");
419 for (
auto cell0_it = cells0.begin(), cell1_it = cells1.begin();
420 cell0_it != cells0.end() and cell1_it != cells1.end();
421 ++cell0_it, ++cell1_it)
424 std::span<const std::int32_t> dofs0 = dofmap0->cell_dofs(*cell0_it);
425 for (std::size_t i = 0; i < dofs0.size(); ++i)
426 for (
int k = 0; k < bs0; ++k)
427 local0[bs0 * i + k] = u0_array[bs0 * dofs0[i] + k];
429 if (apply_dof_transformation)
430 apply_dof_transformation(local0, cell_info0, *cell0_it, 1);
434 std::ranges::fill(local1, 0);
435 for (std::size_t i = 0; i < im_shape[0]; ++i)
436 for (std::size_t j = 0; j < im_shape[1]; ++j)
437 local1[i] +=
static_cast<X
>(i_m[im_shape[1] * i + j]) * local0[j];
439 if (apply_inverse_dof_transform)
440 apply_inverse_dof_transform(local1, cell_info1, *cell1_it, 1);
441 std::span<const std::int32_t> dofs1 = dofmap1->cell_dofs(*cell1_it);
442 for (std::size_t i = 0; i < dofs1.size(); ++i)
443 for (
int k = 0; k < bs1; ++k)
444 u1_array[bs1 * dofs1[i] + k] = local1[bs1 * i + k];
462template <dolfinx::scalar T, std::
floating_po
int U>
463void interpolate_nonmatching_maps(Function<T, U>& u1,
464 mesh::CellRange
auto&& cells1,
465 const Function<T, U>& u0,
466 mesh::CellRange
auto&& cells0)
469 auto V0 = u0.function_space();
471 auto mesh0 = V0->mesh();
475 const int tdim = mesh0->topology()->dim();
476 const int gdim = mesh0->geometry().dim();
479 auto V1 = u1.function_space();
481 auto mesh1 = V1->mesh();
483 auto element0 = V0->element();
485 auto element1 = V1->element();
488 std::span<const std::uint32_t> cell_info0;
489 std::span<const std::uint32_t> cell_info1;
490 if (element1->needs_dof_transformations()
491 or element0->needs_dof_transformations())
493 mesh0->topology_mutable()->create_cell_permutations();
494 cell_info0 = std::span(mesh0->topology()->get_cell_permutation_info());
495 mesh1->topology_mutable()->create_cell_permutations();
496 cell_info1 = std::span(mesh1->topology()->get_cell_permutation_info());
500 auto dofmap0 = V0->dofmap();
501 auto dofmap1 = V1->dofmap();
503 const auto [X, Xshape] = element1->interpolation_points();
506 const int bs0 = element0->block_size();
507 const int bs1 = element1->block_size();
508 auto apply_dof_transformation0 = element0->template dof_transformation_fn<U>(
510 auto apply_inv_dof_transform1 = element1->template dof_transformation_fn<T>(
514 const std::size_t dim0 = element0->space_dimension() / bs0;
515 const std::size_t value_size_ref0 = element0->reference_value_size();
518 const std::size_t value_size0 = V0->element()->physical_base_value_size();
520 const CoordinateElement<U>& cmap = mesh0->geometry().cmaps().front();
521 auto x_dofmap = mesh0->geometry().dofmaps().front();
522 std::span<const U> x_g = mesh0->geometry().x();
528 const std::array<std::size_t, 4> phi_shape
529 = cmap.tabulate_shape(1, Xshape[0]);
530 std::vector<U> phi_b(
531 std::reduce(phi_shape.begin(), phi_shape.end(), 1, std::multiplies{}));
532 md::mdspan<
const U, md::extents<std::size_t, md::dynamic_extent,
533 md::dynamic_extent, md::dynamic_extent, 1>>
534 phi(phi_b.data(), phi_shape);
535 cmap.tabulate(1, X, Xshape, phi_b);
538 const auto [_basis_derivatives_reference0, b0shape]
539 = element0->tabulate(X, Xshape, 0);
540 md::mdspan<
const U, std::extents<std::size_t, 1, md::dynamic_extent,
541 md::dynamic_extent, md::dynamic_extent>>
542 basis_derivatives_reference0(_basis_derivatives_reference0.data(),
546 std::vector<T> local1(element1->space_dimension());
547 std::vector<T> coeffs0(element0->space_dimension());
549 std::vector<U> basis0_b(Xshape[0] * dim0 * value_size0);
550 md::mdspan<U, std::dextents<std::size_t, 3>> basis0(
551 basis0_b.data(), Xshape[0], dim0, value_size0);
553 std::vector<U> basis_reference0_b(Xshape[0] * dim0 * value_size_ref0);
554 md::mdspan<U, std::dextents<std::size_t, 3>> basis_reference0(
555 basis_reference0_b.data(), Xshape[0], dim0, value_size_ref0);
561 const std::size_t value_size1 = V1->element()->value_size();
562 const std::size_t value_size_ref1
563 = element1->reference_value_size() *
static_cast<std::size_t
>(bs1);
564 std::vector<T> values0_b(Xshape[0] * 1 * value_size1);
566 T, md::extents<std::size_t, md::dynamic_extent, 1, md::dynamic_extent>>
567 values0(values0_b.data(), Xshape[0], 1, value_size1);
569 std::vector<T> mapped_values_b(Xshape[0] * 1 * value_size_ref1);
571 T, md::extents<std::size_t, md::dynamic_extent, 1, md::dynamic_extent>>
572 mapped_values0(mapped_values_b.data(), Xshape[0], 1, value_size_ref1);
574 const std::size_t num_dofs_g = cmap.dim();
575 std::vector<U> coord_dofs_b(num_dofs_g * gdim);
576 md::mdspan<U, std::dextents<std::size_t, 2>> coord_dofs(coord_dofs_b.data(),
579 std::vector<U> J_b(Xshape[0] * gdim * tdim);
580 md::mdspan<U, std::dextents<std::size_t, 3>> J(J_b.data(), Xshape[0], gdim,
582 std::vector<U> K_b(Xshape[0] * tdim * gdim);
583 md::mdspan<U, std::dextents<std::size_t, 3>> K(K_b.data(), Xshape[0], tdim,
585 std::vector<U> detJ(Xshape[0]);
586 std::vector<U> det_scratch(2 * gdim * tdim);
589 const auto [_Pi_1, pi_shape] = element1->interpolation_operator();
590 impl::mdspan_t<const U, 2> Pi_1(_Pi_1.data(), pi_shape);
592 using u_t = md::mdspan<U, std::dextents<std::size_t, 2>>;
593 using U_t = md::mdspan<const U, std::dextents<std::size_t, 2>>;
594 using J_t = md::mdspan<const U, std::dextents<std::size_t, 2>>;
595 using K_t = md::mdspan<const U, std::dextents<std::size_t, 2>>;
596 auto push_forward_fn0
597 = element0->basix_element().template map_fn<u_t, U_t, J_t, K_t>();
599 using v_t = md::mdspan<const T, std::dextents<std::size_t, 2>>;
600 using V_t =
decltype(md::submdspan(mapped_values0, 0, md::full_extent,
603 = element1->basix_element().template map_fn<V_t, v_t, K_t, J_t>();
606 std::span<const T> array0 = u0.x()->array();
607 std::span<T> array1 = u1.x()->array();
608 if (cells0.size() != cells1.size())
609 throw std::invalid_argument(
"Length of cells0 and cells1 must match.");
610 for (
auto cell0_it = cells0.begin(), cell1_it = cells1.begin();
611 cell0_it != cells0.end() and cell1_it != cells1.end();
612 ++cell0_it, ++cell1_it)
615 auto x_dofs = md::submdspan(x_dofmap, *cell0_it, md::full_extent);
616 for (std::size_t i = 0; i < num_dofs_g; ++i)
618 const int pos = 3 * x_dofs[i];
619 for (
int j = 0; j < gdim; ++j)
620 coord_dofs(i, j) = x_g[pos + j];
624 std::ranges::fill(J_b, 0);
625 for (std::size_t p = 0; p < Xshape[0]; ++p)
628 = md::submdspan(phi, std::pair(1, tdim + 1), p, md::full_extent, 0);
629 auto _J = md::submdspan(J, p, md::full_extent, md::full_extent);
630 cmap.compute_jacobian(dphi, coord_dofs, _J);
631 auto _K = md::submdspan(K, p, md::full_extent, md::full_extent);
632 cmap.compute_jacobian_inverse(_J, _K);
633 detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch);
638 for (std::size_t k0 = 0; k0 < basis_reference0.extent(0); ++k0)
639 for (std::size_t k1 = 0; k1 < basis_reference0.extent(1); ++k1)
640 for (std::size_t k2 = 0; k2 < basis_reference0.extent(2); ++k2)
641 basis_reference0(k0, k1, k2)
642 = basis_derivatives_reference0(0, k0, k1, k2);
644 if (apply_dof_transformation0)
646 for (std::size_t p = 0; p < Xshape[0]; ++p)
648 apply_dof_transformation0(
649 std::span(basis_reference0_b.data() + p * dim0 * value_size_ref0,
650 dim0 * value_size_ref0),
651 cell_info0, *cell0_it, value_size_ref0);
655 for (std::size_t i = 0; i < basis0.extent(0); ++i)
657 auto _u = md::submdspan(basis0, i, md::full_extent, md::full_extent);
658 auto _U = md::submdspan(basis_reference0, i, md::full_extent,
660 auto _K = md::submdspan(K, i, md::full_extent, md::full_extent);
661 auto _J = md::submdspan(J, i, md::full_extent, md::full_extent);
662 push_forward_fn0(_u, _U, _J, detJ[i], _K);
666 const int dof_bs0 = dofmap0->bs();
667 std::span<const std::int32_t> dofs0 = dofmap0->cell_dofs(*cell0_it);
668 for (std::size_t i = 0; i < dofs0.size(); ++i)
669 for (
int k = 0; k < dof_bs0; ++k)
670 coeffs0[dof_bs0 * i + k] = array0[dof_bs0 * dofs0[i] + k];
674 for (std::size_t p = 0; p < Xshape[0]; ++p)
676 for (
int k = 0; k < bs0; ++k)
678 for (std::size_t j = 0; j < value_size0; ++j)
681 for (std::size_t i = 0; i < dim0; ++i)
682 acc += coeffs0[bs0 * i + k] *
static_cast<X
>(basis0(p, i, j));
683 values0(p, 0, j * bs0 + k) = acc;
689 for (std::size_t i = 0; i < values0.extent(0); ++i)
691 auto _u = md::submdspan(values0, i, md::full_extent, md::full_extent);
693 = md::submdspan(mapped_values0, i, md::full_extent, md::full_extent);
694 auto _K = md::submdspan(K, i, md::full_extent, md::full_extent);
695 auto _J = md::submdspan(J, i, md::full_extent, md::full_extent);
696 pull_back_fn1(_U, _u, _K, 1.0 / detJ[i], _J);
700 = md::submdspan(mapped_values0, md::full_extent, 0, md::full_extent);
701 interpolation_apply(Pi_1, values, std::span(local1), bs1);
702 if (apply_inv_dof_transform1)
703 apply_inv_dof_transform1(local1, cell_info1, *cell1_it, 1);
706 const int dof_bs1 = dofmap1->bs();
707 std::span<const std::int32_t> dofs1 = dofmap1->cell_dofs(*cell1_it);
708 for (std::size_t i = 0; i < dofs1.size(); ++i)
709 for (
int k = 0; k < dof_bs1; ++k)
710 array1[dof_bs1 * dofs1[i] + k] = local1[dof_bs1 * i + k];
725template <dolfinx::scalar T, std::
floating_po
int U>
726void point_evaluation(
const FiniteElement<U>& element,
bool symmetric,
727 const DofMap& dofmap, mesh::CellRange
auto&& cells,
728 std::span<const std::uint32_t> cell_info,
729 std::span<const T> f, std::array<std::size_t, 2> fshape,
735 const int element_bs = element.block_size();
736 const int num_scalar_dofs = element.space_dimension() / element_bs;
737 const int dofmap_bs = dofmap.bs();
739 auto apply_inv_transpose_dof_transformation
740 = element.template dof_transformation_fn<T>(
742 std::vector<T> coeffs_b(num_scalar_dofs);
745 const bool same_bs = (dofmap_bs == element_bs);
749 std::size_t matrix_size = 0;
750 while (matrix_size * matrix_size < fshape[0])
754 for (
auto cell_it =
cells.begin(); cell_it !=
cells.end(); ++cell_it)
765 std::size_t rowstart = 0;
766 std::span<const std::int32_t> dofs = dofmap.cell_dofs(*cell_it);
767 std::size_t offset = std::ranges::distance(
cells.begin(), cell_it);
768 for (
int k = 0; k < element_bs; ++k)
770 if (k - rowstart > row)
779 std::next(f.begin(), (row * matrix_size + k - rowstart) * fshape[1]
780 + offset * num_scalar_dofs),
781 num_scalar_dofs, coeffs_b.data());
782 if (apply_inv_transpose_dof_transformation)
784 apply_inv_transpose_dof_transformation(coeffs_b, cell_info, *cell_it,
789 for (
int i = 0; i < num_scalar_dofs; ++i)
790 coeffs[dofmap_bs * dofs[i] + k] = coeffs_b[i];
794 for (
int i = 0; i < num_scalar_dofs; ++i)
796 std::div_t pos = std::div(i * element_bs + k, dofmap_bs);
797 coeffs[dofmap_bs * dofs[pos.quot] + pos.rem] = coeffs_b[i];
806 for (
auto cell_it =
cells.begin(); cell_it !=
cells.end(); ++cell_it)
808 std::size_t offset = std::ranges::distance(
cells.begin(), cell_it);
809 std::span<const std::int32_t> dofs = dofmap.cell_dofs(*cell_it);
810 for (
int k = 0; k < element_bs; ++k)
815 std::next(f.begin(), k * fshape[1] + offset * num_scalar_dofs),
816 num_scalar_dofs, coeffs_b.data());
817 if (apply_inv_transpose_dof_transformation)
819 apply_inv_transpose_dof_transformation(coeffs_b, cell_info, *cell_it,
824 for (
int i = 0; i < num_scalar_dofs; ++i)
825 coeffs[dofmap_bs * dofs[i] + k] = coeffs_b[i];
829 for (
int i = 0; i < num_scalar_dofs; ++i)
831 std::div_t pos = std::div(i * element_bs + k, dofmap_bs);
832 coeffs[dofmap_bs * dofs[pos.quot] + pos.rem] = coeffs_b[i];
851template <dolfinx::scalar T, std::
floating_po
int U>
852void identity_mapped_evaluation(
const FiniteElement<U>& element,
bool symmetric,
853 const DofMap& dofmap,
854 mesh::CellRange
auto&& cells,
855 std::span<const std::uint32_t> cell_info,
856 std::span<const T> f,
857 std::array<std::size_t, 2> fshape,
864 throw std::invalid_argument(
865 "Interpolation into this element not supported.");
867 const int element_bs = element.block_size();
868 const int num_scalar_dofs = element.space_dimension() / element_bs;
869 const int dofmap_bs = dofmap.bs();
872 const int element_vs = element.reference_value_size();
873 assert(element_vs == element.physical_base_value_size());
874 if (element_vs > 1 and element_bs > 1)
875 throw std::runtime_error(
"Interpolation into this element not supported.");
878 const auto [_Pi, pi_shape] = element.interpolation_operator();
879 md::mdspan<const U, std::dextents<std::size_t, 2>> Pi(_Pi.data(), pi_shape);
880 const std::size_t num_interp_points = Pi.extent(1);
881 assert(
static_cast<int>(Pi.extent(0)) == num_scalar_dofs);
883 auto apply_inv_transpose_dof_transformation
884 = element.template dof_transformation_fn<T>(
888 const bool same_bs = (dofmap_bs == element_bs);
891 std::vector<T> ref_data_b(num_interp_points);
892 md::mdspan<T, md::extents<std::size_t, md::dynamic_extent, 1>> ref_data(
893 ref_data_b.data(), num_interp_points, 1);
894 std::vector<T> coeffs_b(num_scalar_dofs);
895 for (
auto cell_it =
cells.begin(); cell_it !=
cells.end(); ++cell_it)
897 std::size_t offset = std::ranges::distance(
cells.begin(), cell_it);
898 std::span<const std::int32_t> dofs = dofmap.cell_dofs(*cell_it);
899 for (
int k = 0; k < element_bs; ++k)
901 for (
int i = 0; i < element_vs; ++i)
904 std::next(f.begin(), (i + k) * fshape[1]
905 + offset * num_interp_points / element_vs),
906 num_interp_points / element_vs,
907 std::next(ref_data_b.begin(), i * num_interp_points / element_vs));
910 impl::interpolation_apply(Pi, ref_data, std::span(coeffs_b), 1);
911 if (apply_inv_transpose_dof_transformation)
913 apply_inv_transpose_dof_transformation(coeffs_b, cell_info, *cell_it,
918 for (
int i = 0; i < num_scalar_dofs; ++i)
919 coeffs[dofmap_bs * dofs[i] + k] = coeffs_b[i];
923 for (
int i = 0; i < num_scalar_dofs; ++i)
925 std::div_t pos = std::div(i * element_bs + k, dofmap_bs);
926 coeffs[dofmap_bs * dofs[pos.quot] + pos.rem] = coeffs_b[i];
945template <dolfinx::scalar T, std::
floating_po
int U>
946void piola_mapped_evaluation(
const FiniteElement<U>& element,
bool symmetric,
947 const DofMap& dofmap, mesh::CellRange
auto&& cells,
948 std::span<const std::uint32_t> cell_info,
949 std::span<const T> f,
950 std::array<std::size_t, 2> fshape,
951 const mesh::Mesh<U>& mesh, std::span<T> coeffs)
954 throw std::invalid_argument(
955 "Interpolation into this element not supported.");
957 const int gdim = mesh.geometry().dim();
958 assert(mesh.topology());
959 const int tdim = mesh.topology()->dim();
961 const int element_bs = element.block_size();
962 const int num_scalar_dofs = element.space_dimension() / element_bs;
964 const int value_size = element.physical_base_value_size();
965 const int dofmap_bs = dofmap.bs();
968 const bool same_bs = (dofmap_bs == element_bs);
970 md::mdspan<const T, md::dextents<std::size_t, 2>> _f(f.data(), fshape);
973 const auto [X, Xshape] = element.interpolation_points();
976 throw std::invalid_argument(
977 "Interpolation into this space is not yet supported.");
980 if (_f.extent(1) !=
cells.size() * Xshape[0])
981 throw std::invalid_argument(
"Interpolation data has the wrong shape.");
984 const CoordinateElement<U>& cmap = mesh.geometry().cmaps().front();
987 auto x_dofmap = mesh.geometry().dofmaps().front();
988 const int num_dofs_g = cmap.dim();
989 std::span<const U> x_g = mesh.geometry().x();
992 std::vector<U> J_b(Xshape[0] * gdim * tdim);
993 md::mdspan<U, std::dextents<std::size_t, 3>> J(J_b.data(), Xshape[0], gdim,
995 std::vector<U> K_b(Xshape[0] * tdim * gdim);
996 md::mdspan<U, std::dextents<std::size_t, 3>> K(K_b.data(), Xshape[0], tdim,
998 std::vector<U> detJ(Xshape[0]);
999 std::vector<U> det_scratch(2 * gdim * tdim);
1001 std::vector<U> coord_dofs_b(num_dofs_g * gdim);
1002 md::mdspan<U, std::dextents<std::size_t, 2>> coord_dofs(coord_dofs_b.data(),
1004 const std::size_t value_size_ref = element.reference_value_size();
1005 std::vector<T> ref_data_b(Xshape[0] * 1 * value_size_ref);
1007 T, md::extents<std::size_t, md::dynamic_extent, 1, md::dynamic_extent>>
1008 ref_data(ref_data_b.data(), Xshape[0], 1, value_size_ref);
1010 std::vector<T> _vals_b(Xshape[0] * 1 * value_size);
1012 T, md::extents<std::size_t, md::dynamic_extent, 1, md::dynamic_extent>>
1013 _vals(_vals_b.data(), Xshape[0], 1, value_size);
1017 std::array<std::size_t, 4> phi_shape = cmap.tabulate_shape(1, Xshape[0]);
1018 std::vector<U> phi_b(
1019 std::reduce(phi_shape.begin(), phi_shape.end(), 1, std::multiplies{}));
1020 md::mdspan<
const U, md::extents<std::size_t, md::dynamic_extent,
1021 md::dynamic_extent, md::dynamic_extent, 1>>
1022 phi(phi_b.data(), phi_shape);
1023 cmap.tabulate(1, X, Xshape, phi_b);
1024 auto dphi = md::submdspan(phi, std::pair(1, tdim + 1), md::full_extent,
1025 md::full_extent, 0);
1027 std::function<void(std::span<T>, std::span<const std::uint32_t>, std::int32_t,
1029 apply_inv_trans_dof_transformation
1030 = element.template dof_transformation_fn<T>(
1034 const auto [_Pi, pi_shape] = element.interpolation_operator();
1035 md::mdspan<const U, std::dextents<std::size_t, 2>> Pi(_Pi.data(), pi_shape);
1037 using u_t = md::mdspan<const T, md::dextents<std::size_t, 2>>;
1039 =
decltype(md::submdspan(ref_data, 0, md::full_extent, md::full_extent));
1040 using J_t = md::mdspan<const U, md::dextents<std::size_t, 2>>;
1041 using K_t = md::mdspan<const U, md::dextents<std::size_t, 2>>;
1043 = element.basix_element().template map_fn<U_t, u_t, J_t, K_t>();
1045 std::vector<T> coeffs_b(num_scalar_dofs);
1046 for (
auto cell_it =
cells.begin(); cell_it !=
cells.end(); ++cell_it)
1048 auto x_dofs = md::submdspan(x_dofmap, *cell_it, md::full_extent);
1049 for (
int i = 0; i < num_dofs_g; ++i)
1051 const int pos = 3 * x_dofs[i];
1052 for (
int j = 0; j < gdim; ++j)
1053 coord_dofs(i, j) = x_g[pos + j];
1057 std::ranges::fill(J_b, 0);
1058 for (std::size_t p = 0; p < Xshape[0]; ++p)
1060 auto _dphi = md::submdspan(dphi, md::full_extent, p, md::full_extent);
1061 auto _J = md::submdspan(J, p, md::full_extent, md::full_extent);
1062 cmap.compute_jacobian(_dphi, coord_dofs, _J);
1063 auto _K = md::submdspan(K, p, md::full_extent, md::full_extent);
1064 cmap.compute_jacobian_inverse(_J, _K);
1065 detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch);
1068 const std::size_t offset = std::ranges::distance(
cells.begin(), cell_it);
1069 std::span<const std::int32_t> dofs = dofmap.cell_dofs(*cell_it);
1070 for (
int k = 0; k < element_bs; ++k)
1073 for (
int m = 0; m < value_size; ++m)
1075 for (std::size_t k0 = 0; k0 < Xshape[0]; ++k0)
1078 = f[fshape[1] * (k * value_size + m) + offset * Xshape[0] + k0];
1083 for (std::size_t i = 0; i < Xshape[0]; ++i)
1085 auto _u = md::submdspan(_vals, i, md::full_extent, md::full_extent);
1086 auto _U = md::submdspan(ref_data, i, md::full_extent, md::full_extent);
1087 auto _K = md::submdspan(K, i, md::full_extent, md::full_extent);
1088 auto _J = md::submdspan(J, i, md::full_extent, md::full_extent);
1089 pull_back_fn(_U, _u, _K, 1.0 / detJ[i], _J);
1092 auto ref = md::submdspan(ref_data, md::full_extent, 0, md::full_extent);
1093 impl::interpolation_apply(Pi, ref, std::span(coeffs_b), element_bs);
1094 if (apply_inv_trans_dof_transformation)
1095 apply_inv_trans_dof_transformation(coeffs_b, cell_info, *cell_it, 1);
1098 assert(coeffs_b.size() ==
static_cast<std::size_t
>(num_scalar_dofs));
1101 for (
int i = 0; i < num_scalar_dofs; ++i)
1102 coeffs[dofmap_bs * dofs[i] + k] = coeffs_b[i];
1106 for (
int i = 0; i < num_scalar_dofs; ++i)
1108 std::div_t pos = std::div(i * element_bs + k, dofmap_bs);
1109 coeffs[dofmap_bs * dofs[pos.quot] + pos.rem] = coeffs_b[i];
1144template <std::
floating_po
int T>
1148 bool allow_extrapolation =
true)
1155 std::vector<T> x(coords.size());
1156 std::size_t num_points = coords.size() / 3;
1157 for (std::size_t i = 0; i < num_points; ++i)
1158 for (std::size_t j = 0; j < 3; ++j)
1159 x[3 * i + j] = coords[i + j * num_points];
1163 allow_extrapolation);
1166template <dolfinx::scalar T, std::
floating_po
int U>
1168 std::array<std::size_t, 2> fshape,
1172 const int index = 0;
1175 const int element_bs = element->block_size();
1176 if (
int num_sub = element->num_sub_elements();
1177 num_sub > 0 and num_sub != element_bs)
1179 throw std::invalid_argument(
"Cannot directly interpolate a mixed space. "
1180 "Interpolate into subspaces.");
1189 != (std::size_t)u.
function_space()->elements(index)->value_size()
1190 or f.size() != fshape[0] * fshape[1])
1192 throw std::invalid_argument(
"Interpolation data has the wrong shape/size.");
1195 spdlog::debug(
"Check for dof transformation");
1196 std::span<const std::uint32_t> cell_info;
1197 if (element->needs_dof_transformations())
1199 mesh->topology_mutable()->create_cell_permutations();
1200 cell_info = std::span(
mesh->topology()->get_cell_permutation_info());
1204 spdlog::debug(
"Interpolate: get dofmap");
1209 std::span<T> coeffs = u.
x()->array();
1212 element->map_ident() and element->interpolation_ident())
1216 spdlog::debug(
"Interpolate: point evaluation");
1217 impl::point_evaluation(*element, symmetric, *dofmap, cells, cell_info, f,
1220 else if (element->map_ident())
1222 spdlog::debug(
"Interpolate: identity-mapped evaluation");
1223 impl::identity_mapped_evaluation(*element, symmetric, *dofmap, cells,
1224 cell_info, f, fshape, coeffs);
1228 spdlog::debug(
"Interpolate: Piola-mapped evaluation");
1229 impl::piola_mapped_evaluation(*element, symmetric, *dofmap, cells,
1230 cell_info, f, fshape, *
mesh, coeffs);
1250template <dolfinx::scalar T, std::
floating_po
int U>
1257 MPI_Comm comm = mesh1->comm();
1263 MPI_Comm_compare(comm, mesh0->comm(), &result);
1264 if (result == MPI_UNEQUAL)
1266 throw std::invalid_argument(
"Interpolation on different meshes is only "
1267 "supported on the same communicator.");
1271 assert(mesh1->topology());
1272 auto cell_map = mesh1->topology()->index_map(mesh1->topology()->dim());
1276 const std::size_t value_size = element1->value_size();
1278 const std::vector<int>& dest_ranks = interpolation_data.
src_owner;
1279 const std::vector<int>& src_ranks = interpolation_data.
dest_owners;
1280 const std::vector<U>& recv_points = interpolation_data.
dest_points;
1281 const std::vector<std::int32_t>& evaluation_cells
1285 std::vector<T> send_values(recv_points.size() / 3 * value_size);
1286 u0.
eval(recv_points, {recv_points.size() / 3, (std::size_t)3},
1287 evaluation_cells, send_values, {recv_points.size() / 3, value_size},
1291 std::vector<T> values_b(dest_ranks.size() * value_size);
1292 md::mdspan<const T, md::dextents<std::size_t, 2>> _send_values(
1293 send_values.data(), src_ranks.size(), value_size);
1294 impl::scatter_values(comm, src_ranks, dest_ranks, _send_values,
1295 std::span(values_b));
1298 md::mdspan<const T, md::dextents<std::size_t, 2>> values(
1299 values_b.data(), dest_ranks.size(), value_size);
1300 std::vector<T> valuesT_b(value_size * dest_ranks.size());
1301 md::mdspan<T, md::dextents<std::size_t, 2>> valuesT(
1302 valuesT_b.data(), value_size, dest_ranks.size());
1303 for (std::size_t i = 0; i < values.extent(0); ++i)
1304 for (std::size_t j = 0; j < values.extent(1); ++j)
1305 valuesT(j, i) = values(i, j);
1328template <dolfinx::scalar T, std::
floating_po
int U>
1332 if (cells0.size() != cells1.size())
1333 throw std::invalid_argument(
"Length of cell lists do not match.");
1341 auto e0 = V0->element();
1343 auto e1 = V1->element();
1345 if (!std::ranges::equal(e0->value_shape(), e1->value_shape()))
1347 throw std::invalid_argument(
1348 "Interpolation: elements have different value dimensions");
1351 if (V1->mesh() == V0->mesh() and (e1 == e0 or *e1 == *e0))
1354 if (e1->block_size() != e0->block_size())
1355 throw std::invalid_argument(
"Mismatch in element block size.");
1358 std::shared_ptr<const DofMap> dofmap0 = V0->dofmap();
1360 std::shared_ptr<const DofMap> dofmap1 = V1->dofmap();
1364 const int bs0 = dofmap0->bs();
1365 const int bs1 = dofmap1->bs();
1366 std::span<T> u1_array = u1.
x()->array();
1367 std::span<const T> u0_array = u0.
x()->array();
1368 assert(cells0.size() == cells1.size());
1369 for (
auto cell0_it = cells0.begin(), cell1_it = cells1.begin();
1370 cell0_it != cells0.end() and cell1_it != cells1.end();
1371 ++cell0_it, ++cell1_it)
1374 std::span<const std::int32_t> dofs0 = dofmap0->cell_dofs(*cell0_it);
1375 std::span<const std::int32_t> dofs1 = dofmap1->cell_dofs(*cell1_it);
1376 assert(bs0 * dofs0.size() == bs1 * dofs1.size());
1377 for (std::size_t i = 0; i < dofs0.size(); ++i)
1379 for (
int k = 0; k < bs0; ++k)
1381 int index = bs0 * i + k;
1382 std::div_t dv1 = std::div(index, bs1);
1383 u1_array[bs1 * dofs1[dv1.quot] + dv1.rem]
1384 = u0_array[bs0 * dofs0[i] + k];
1389 else if (e1->map_type() == e0->map_type())
1392 impl::interpolate_same_map(u1, cells1, u0, cells0);
1397 impl::interpolate_nonmatching_maps(u1, cells1, u0, cells0);
1410template <dolfinx::scalar T, std::
floating_po
int U>
1412 std::ranges::input_range
auto&& cells)
1419 throw std::invalid_argument(
"Meshes do no match.");
1431template <dolfinx::scalar T, std::
floating_po
int U>
1437 std::ranges::copy(u0.
x()->array(), u1.
x()->array().begin());
1440 auto mesh = V1->mesh();
1442 assert(
mesh->topology());
1443 auto map =
mesh->topology()->index_map(
mesh->topology()->dim());
1445 std::int32_t num_cells = map->size_local() + map->num_ghosts();
Degree-of-freedom map representations and tools.
Definition CoordinateElement.h:39
void tabulate(int nd, std::span< const T > X, std::array< std::size_t, 2 > shape, std::span< T > basis) const
Evaluate basis values and derivatives at set of points.
Definition CoordinateElement.cpp:60
std::array< std::size_t, 4 > tabulate_shape(std::size_t nd, std::size_t num_points) const
Shape of array to fill when calling tabulate.
Definition CoordinateElement.cpp:53
int dim() const
The dimension of the coordinate element space.
Definition CoordinateElement.cpp:223
Model of a finite element.
Definition FiniteElement.h:199
std::pair< std::vector< geometry_type >, std::array< std::size_t, 2 > > interpolation_points() const
Points on the reference cell at which an expression needs to be evaluated in order to interpolate the...
Definition FiniteElement.cpp:537
mesh::CellType cell_type() const noexcept
Cell shape that the element is defined on.
Definition FiniteElement.cpp:333
std::shared_ptr< const FunctionSpace< geometry_type > > function_space() const
Access the function space.
Definition Function.h:145
void eval(std::span< const geometry_type > x, std::array< std::size_t, 2 > xshape, mesh::CellRange auto &&cells, std::span< value_type > u, std::array< std::size_t, 2 > ushape, double tol, int maxit) const
Evaluate the Function at points.
Definition Function.h:318
std::shared_ptr< const la::Vector< value_type > > x() const
Underlying vector (const version).
Definition Function.h:151
Geometry stores the geometry imposed on a mesh.
Definition Geometry.h:39
A Mesh consists of a set of connected and numbered mesh topological entities, and geometry data.
Definition Mesh.h:25
Requirement on range of cell indices.
Definition Topology.h:32
MPI_Datatype mpi_t
Retrieves the MPI data type associated to the provided type.
Definition MPI.h:326
int rank(MPI_Comm comm)
Return process rank for the communicator.
Definition MPI.cpp:73
void cells(la::SparsityPattern &pattern, const std::pair< R0, R1 > &cells, std::array< std::reference_wrapper< const DofMap >, 2 > dofmaps)
Iterate over cells and insert entries into sparsity pattern.
Definition sparsitybuild.h:37
Finite element method functionality.
Definition assemble_expression_impl.h:22
geometry::PointOwnershipData< T > create_interpolation_data(const mesh::Geometry< T > &geometry0, const FiniteElement< T > &element0, const mesh::Mesh< T > &mesh1, mesh::CellRange auto &&cells, T padding, bool allow_extrapolation=true)
Generate data needed to interpolate finite element fem::Function's across different meshes.
Definition interpolate.h:1145
@ transpose
Transpose.
Definition FiniteElement.h:32
@ inverse_transpose
Transpose inverse.
Definition FiniteElement.h:34
@ standard
Standard.
Definition FiniteElement.h:31
std::vector< T > interpolation_coords(const fem::FiniteElement< T > &element, const mesh::Geometry< T > &geometry, mesh::CellRange auto &&cells)
Compute the evaluation points in the physical space at which an expression should be computed to inte...
Definition interpolate.h:44
void interpolate(Function< T, U > &u1, mesh::CellRange auto &&cells1, const Expression< T, U > &e0, mesh::CellRange auto &&cells0)
Interpolate an Expression into a Function over a subset of cells.
Definition expression_evaluate.h:165
Geometry data structures and algorithms.
Definition BoundingBoxTree.h:24
PointOwnershipData< T > determine_point_ownership(const mesh::Mesh< T > &mesh, std::span< const T > points, T padding, std::optional< std::span< const std::int32_t > > cells, bool find_closest_cell=true)
Determine, for a set of points, the owning process of the cell (if any) that contains each point.
Definition utils.h:817
Mesh data structures and algorithms on meshes.
Definition DofMap.h:32
CellType
Cell type identifier.
Definition cell_types.h:24
Information on the ownership of points distributed across processes.
Definition utils.h:35
std::vector< T > dest_points
Points that are owned by current process.
Definition utils.h:40
std::vector< std::int32_t > dest_cells
Definition utils.h:42
std::vector< int > dest_owners
Ranks that sent dest_points to current process.
Definition utils.h:39
std::vector< int > src_owner
Definition utils.h:36