Note: this is documentation for an old release. View the latest documentation at docs.fenicsproject.org/dolfinx/v0.9.0/cpp/doxygen/de/ded/xdmf__mesh_8h_source.html
DOLFINx  0.4.1
DOLFINx C++ interface
xdmf_mesh.h
1 // Copyright (C) 2012-2018 Chris N. Richardson and Garth N. Wells
2 //
3 // This file is part of DOLFINx (https://www.fenicsproject.org)
4 //
5 // SPDX-License-Identifier: LGPL-3.0-or-later
6 
7 #pragma once
8 
9 #include <hdf5.h>
10 #include <mpi.h>
11 #include <string>
12 #include <xtensor/xtensor.hpp>
13 #include <xtl/xspan.hpp>
14 
15 namespace pugi
16 {
17 class xml_node;
18 } // namespace pugi
19 
20 namespace dolfinx
21 {
22 
23 namespace mesh
24 {
25 class Geometry;
26 class Mesh;
27 class Topology;
28 } // namespace mesh
29 
31 namespace io::xdmf_mesh
32 {
33 
38 void add_mesh(MPI_Comm comm, pugi::xml_node& xml_node, const hid_t h5_id,
39  const mesh::Mesh& mesh, const std::string path_prefix);
40 
51 void add_topology_data(MPI_Comm comm, pugi::xml_node& xml_node,
52  const hid_t h5_id, const std::string path_prefix,
53  const mesh::Topology& topology,
54  const mesh::Geometry& geometry, int cell_dim,
55  const xtl::span<const std::int32_t>& entities);
56 
58 void add_geometry_data(MPI_Comm comm, pugi::xml_node& xml_node,
59  const hid_t h5_id, const std::string path_prefix,
60  const mesh::Geometry& geometry);
61 
64 xt::xtensor<double, 2> read_geometry_data(MPI_Comm comm, const hid_t h5_id,
65  const pugi::xml_node& node);
66 
69 xt::xtensor<std::int64_t, 2> read_topology_data(MPI_Comm comm,
70  const hid_t h5_id,
71  const pugi::xml_node& node);
72 
73 } // namespace io::xdmf_mesh
74 } // namespace dolfinx
Geometry stores the geometry imposed on a mesh.
Definition: Geometry.h:28
A Mesh consists of a set of connected and numbered mesh topological entities, and geometry data.
Definition: Mesh.h:33
Topology stores the topology of a mesh, consisting of mesh entities and connectivity (incidence relat...
Definition: Topology.h:57
void add_mesh(MPI_Comm comm, pugi::xml_node &xml_node, const hid_t h5_id, const mesh::Mesh &mesh, const std::string path_prefix)
Add Mesh to xml node.
Definition: xdmf_mesh.cpp:200
xt::xtensor< std::int64_t, 2 > read_topology_data(MPI_Comm comm, const hid_t h5_id, const pugi::xml_node &node)
Read Topology data.
Definition: xdmf_mesh.cpp:281
xt::xtensor< double, 2 > read_geometry_data(MPI_Comm comm, const hid_t h5_id, const pugi::xml_node &node)
Read Geometry data.
Definition: xdmf_mesh.cpp:232
void add_topology_data(MPI_Comm comm, pugi::xml_node &xml_node, const hid_t h5_id, const std::string path_prefix, const mesh::Topology &topology, const mesh::Geometry &geometry, int cell_dim, const xtl::span< const std::int32_t > &entities)
Add Topology xml node.
Definition: xdmf_mesh.cpp:18
void add_geometry_data(MPI_Comm comm, pugi::xml_node &xml_node, const hid_t h5_id, const std::string path_prefix, const mesh::Geometry &geometry)
Add Geometry xml node.
Definition: xdmf_mesh.cpp:147