Note: this is documentation for an old release. View the latest documentation at docs.fenicsproject.org/dolfinx/v0.9.0/cpp/doxygen/de/d78/refinement_2utils_8h_source.html
DOLFINx  0.4.1
DOLFINx C++ interface
utils.h
1 // Copyright (C) 2012-2020 Chris Richardson
2 //
3 // This file is part of DOLFINx (https://www.fenicsproject.org)
4 //
5 // SPDX-License-Identifier: LGPL-3.0-or-later
6 
7 #pragma once
8 
9 #include <cstdint>
10 #include <dolfinx/common/MPI.h>
11 #include <map>
12 #include <memory>
13 #include <set>
14 #include <vector>
15 
16 namespace dolfinx::mesh
17 {
18 template <typename T>
19 class MeshTags;
20 class Mesh;
21 enum class GhostMode;
22 } // namespace dolfinx::mesh
23 
24 namespace dolfinx::common
25 {
26 class IndexMap;
27 }
28 
29 namespace dolfinx::refinement
30 {
31 
40 std::pair<MPI_Comm, std::map<std::int32_t, std::vector<int>>>
41 compute_edge_sharing(const mesh::Mesh& mesh);
42 
50  MPI_Comm neighbor_comm,
51  const std::vector<std::vector<std::int32_t>>& marked_for_update,
52  std::vector<std::int8_t>& marked_edges, const common::IndexMap& map_e);
53 
62 std::pair<std::map<std::int32_t, std::int64_t>, xt::xtensor<double, 2>>
64  MPI_Comm neighbor_comm,
65  const std::map<std::int32_t, std::vector<std::int32_t>>& shared_edges,
66  const mesh::Mesh& mesh, const std::vector<std::int8_t>& marked_edges);
67 
76 mesh::Mesh partition(const mesh::Mesh& old_mesh,
77  const graph::AdjacencyList<std::int64_t>& cell_topology,
78  const xt::xtensor<double, 2>& new_vertex_coordinates,
79  bool redistribute, mesh::GhostMode ghost_mode);
80 
91 std::vector<std::int64_t> adjust_indices(const common::IndexMap& index_map,
92  std::int32_t n);
93 
102 mesh::MeshTags<std::int32_t>
103 transfer_facet_meshtag(const mesh::MeshTags<std::int32_t>& parent_meshtag,
104  const mesh::Mesh& refined_mesh,
105  const std::vector<std::int32_t>& parent_cell,
106  const std::vector<std::int8_t>& parent_facet);
107 
115 mesh::MeshTags<std::int32_t>
116 transfer_cell_meshtag(const mesh::MeshTags<std::int32_t>& parent_meshtag,
117  const mesh::Mesh& refined_mesh,
118  const std::vector<std::int32_t>& parent_cell);
119 } // namespace dolfinx::refinement
Miscellaneous classes, functions and types.
Mesh data structures and algorithms on meshes.
Definition: DofMap.h:30
GhostMode
Enum for different partitioning ghost modes.
Definition: utils.h:27
Mesh refinement algorithms.
mesh::MeshTags< std::int32_t > transfer_cell_meshtag(const mesh::MeshTags< std::int32_t > &parent_meshtag, const mesh::Mesh &refined_mesh, const std::vector< std::int32_t > &parent_cell)
Transfer cell MeshTags from coarse mesh to refined mesh.
Definition: utils.cpp:539
std::pair< std::map< std::int32_t, std::int64_t >, xt::xtensor< double, 2 > > create_new_vertices(MPI_Comm neighbor_comm, const std::map< std::int32_t, std::vector< std::int32_t >> &shared_edges, const mesh::Mesh &mesh, const std::vector< std::int8_t > &marked_edges)
Add new vertex for each marked edge, and create new_vertex_coordinates and global_edge->new_vertex ma...
Definition: utils.cpp:207
void update_logical_edgefunction(MPI_Comm neighbor_comm, const std::vector< std::vector< std::int32_t >> &marked_for_update, std::vector< std::int8_t > &marked_edges, const common::IndexMap &map_e)
Transfer marked edges between processes.
Definition: utils.cpp:172
std::vector< std::int64_t > adjust_indices(const common::IndexMap &index_map, std::int32_t n)
brief description indices to account for extra n values on each process.
Definition: utils.cpp:372
std::pair< MPI_Comm, std::map< std::int32_t, std::vector< int > > > compute_edge_sharing(const mesh::Mesh &mesh)
Compute the sharing of edges between processes.
Definition: utils.cpp:126
mesh::MeshTags< std::int32_t > transfer_facet_meshtag(const mesh::MeshTags< std::int32_t > &parent_meshtag, const mesh::Mesh &refined_mesh, const std::vector< std::int32_t > &parent_cell, const std::vector< std::int8_t > &parent_facet)
Transfer facet MeshTags from coarse mesh to refined mesh.
Definition: utils.cpp:413
mesh::Mesh partition(const mesh::Mesh &old_mesh, const graph::AdjacencyList< std::int64_t > &cell_topology, const xt::xtensor< double, 2 > &new_vertex_coordinates, bool redistribute, mesh::GhostMode ghost_mode)
Use vertex and topology data to partition new mesh across processes.
Definition: utils.cpp:296