10#include "DirichletBC.h"
13#include "assemble_matrix_impl.h"
17#include <basix/mdspan.hpp>
20#include <dolfinx/common/IndexMap.h>
21#include <dolfinx/mesh/Geometry.h>
22#include <dolfinx/mesh/Mesh.h>
23#include <dolfinx/mesh/Topology.h>
34template <dolfinx::scalar T, std::
floating_po
int U>
38namespace dolfinx::fem::impl
41using mdspan2_t = md::mdspan<const std::int32_t, md::dextents<std::size_t, 2>>;
70template <
typename V, MDSpan2Int32 XD, std::floating_point U,
71 dolfinx::scalar T =
typename std::remove_cvref_t<V>::value_type>
72 requires AssemblyVector<V, T>
73void assemble_cells_vector(
74 V&& b, GeometryPack<XD, U> geometry,
const IndexList
auto& cells,
75 const FormArgumentCells<T>
auto& arg0,
const FEkernel<T, U>
auto& kernel,
76 std::span<const T> constants,
77 md::mdspan<
const T, md::dextents<std::size_t, 2>> coeffs,
78 ScratchBuffer<T>
auto be_b, ScratchBuffer<U>
auto cdofs_b)
80 if (std::ranges::empty(cells))
86 const auto dmap = arg0.dofmap.map;
87 const auto bs = arg0.dofmap.bs;
90 const auto& cells0 = arg0.dofmap.entities;
91 const auto& P0 = arg0.transform;
92 std::span<const std::uint32_t> cell_info0 = arg0.cell_info;
94 const auto ndofs_x = geometry.dofmap.extent(1);
95 const auto ndofs = dmap.extent(1);
96 assert(be_b.size() ==
static_cast<std::size_t
>(bs) * ndofs);
97 assert(cdofs_b.size() == 3 *
static_cast<std::size_t
>(ndofs_x));
99 const std::int32_t* dmap_ptr = dmap.data_handle();
100 const T* coeffs_data = coeffs.data_handle();
101 const auto cstride = coeffs.extent(1);
107 const std::size_t num_cells = std::ranges::size(cells);
108 assert(std::ranges::size(cells0) == num_cells);
113 bool same_cells =
false;
114 if constexpr (std::ranges::contiguous_range<
decltype(
cells)>
115 and std::ranges::contiguous_range<
decltype(cells0)>)
117 same_cells = std::ranges::data(cells0) == std::ranges::data(cells)
118 and std::ranges::size(cells0) == num_cells;
122 for (std::size_t index = 0; index < num_cells; ++index)
125 const std::int32_t c =
cells[index];
126 const std::int32_t c0 = same_cells ? c : cells0[index];
128 gather_cell_coordinates(geometry, c, cdofs_b.data());
131 std::ranges::fill(be_b, T(0));
132 kernel(be_b.data(), coeffs_data + index * cstride, constants.data(),
133 cdofs_b.data(),
nullptr,
nullptr,
nullptr);
135 P0(std::span<T>(be_b), cell_info0, c0, 1);
138 const std::int32_t* dofs
139 = dmap_ptr +
static_cast<std::ptrdiff_t
>(c0) * ndofs;
140 for (std::size_t i = 0; i < ndofs; ++i)
142 const std::int32_t dof = bs * dofs[i];
143 for (
int k = 0; k < bs; ++k)
144 b[dof + k] += be_b[bs * i + k];
185template <
typename V, MDSpan2Int32 XD, std::floating_point U,
186 dolfinx::scalar T =
typename std::remove_cvref_t<V>::value_type>
187 requires AssemblyVector<V, T>
188void assemble_entities_vector(
189 V&& b, GeometryPack<XD, U> geometry,
190 md::mdspan<
const std::int32_t,
191 std::extents<std::size_t, md::dynamic_extent, 2>>
193 const FormArgumentEntities<T>
auto& arg0,
const FEkernel<T, U>
auto& kernel,
194 std::span<const T> constants,
195 md::mdspan<
const T, md::dextents<std::size_t, 2>> coeffs,
196 md::mdspan<
const std::uint8_t, md::dextents<std::size_t, 2>> perms,
197 ScratchBuffer<T>
auto be_b, ScratchBuffer<U>
auto cdofs_b)
199 if (entities.empty())
205 const auto dmap = arg0.dofmap.map;
206 const auto bs = arg0.dofmap.bs;
207 const auto entities0 = arg0.dofmap.entities;
208 const auto& P0 = arg0.transform;
209 std::span<const std::uint32_t> cell_info0 = arg0.cell_info;
211 const auto num_dofs = dmap.extent(1);
212 const auto num_x_dofs_cell = geometry.dofmap.extent(1);
213 assert(cdofs_b.size() == 3 *
static_cast<std::size_t
>(num_x_dofs_cell));
214 assert(be_b.size() ==
static_cast<std::size_t
>(bs) * num_dofs);
215 assert(entities0.size() == entities.size());
217 const std::int32_t* dmap_ptr = dmap.data_handle();
221 const T* coeffs_data = coeffs.data_handle();
222 const std::size_t cstride = coeffs.extent(1);
224 for (std::size_t f = 0; f < entities.extent(0); ++f)
228 std::int32_t
cell = entities(f, 0);
229 std::int32_t local_entity = entities(f, 1);
230 std::int32_t cell0 = entities0(f, 0);
232 gather_cell_coordinates(geometry,
cell, cdofs_b.data());
235 std::uint8_t perm = perms.empty() ? 0 : perms(
cell, local_entity);
238 std::ranges::fill(be_b, T(0));
239 kernel(be_b.data(), coeffs_data + f * cstride, constants.data(),
240 cdofs_b.data(), &local_entity, &perm,
nullptr);
242 P0(std::span<T>(be_b), cell_info0, cell0, 1);
245 const std::int32_t* dofs
246 = dmap_ptr +
static_cast<std::ptrdiff_t
>(cell0) * num_dofs;
247 for (std::size_t i = 0; i < num_dofs; ++i)
248 for (
int k = 0; k < bs; ++k)
249 b[bs * dofs[i] + k] += be_b[bs * i + k];
282template <
typename V, MDSpan2Int32 XD, std::floating_point U,
283 dolfinx::scalar T =
typename std::remove_cvref_t<V>::value_type>
284 requires AssemblyVector<V, T>
285void assemble_interior_facets_vector(
286 V&& b, GeometryPack<XD, U> geometry,
287 md::mdspan<
const std::int32_t,
288 std::extents<std::size_t, md::dynamic_extent, 2, 2>>
290 const FormArgumentFacets<T>
auto& arg0,
const FEkernel<T, U>
auto& kernel,
291 std::span<const T> constants,
292 md::mdspan<
const T, md::extents<std::size_t, md::dynamic_extent, 2,
295 md::mdspan<
const std::uint8_t, md::dextents<std::size_t, 2>> perms,
296 ScratchBuffer<T>
auto be_b, ScratchBuffer<U>
auto cdofs_b)
304 const auto dmap = arg0.dofmap.map;
305 const auto bs = arg0.dofmap.bs;
306 const auto facets0 = arg0.dofmap.entities;
307 const auto& P0 = arg0.transform;
308 std::span<const std::uint32_t> cell_info0 = arg0.cell_info;
310 const auto num_x_dofs_cell = geometry.dofmap.extent(1);
311 const auto dmap_size = dmap.extent(1);
312 assert(cdofs_b.size() == 2 *
static_cast<std::size_t
>(num_x_dofs_cell) * 3);
313 assert(be_b.size() ==
static_cast<std::size_t
>(bs) * 2 * dmap_size);
314 assert(facets0.size() == facets.size());
315 U* cdofs0 = cdofs_b.data();
316 U* cdofs1 = cdofs_b.data() + num_x_dofs_cell * 3;
318 const T* coeffs_data = coeffs.data_handle();
319 const auto cstride = 2 * coeffs.extent(2);
323 for (std::size_t f = 0; f < facets.extent(0); ++f)
326 std::array<std::int32_t, 2>
cells{facets(f, 0, 0), facets(f, 1, 0)};
327 std::array<std::int32_t, 2> cells0{facets0(f, 0, 0), facets0(f, 1, 0)};
330 std::array<std::int32_t, 2> local_facet{facets(f, 0, 1), facets(f, 1, 1)};
332 gather_cell_coordinates(geometry, cells[0], cdofs0);
333 gather_cell_coordinates(geometry, cells[1], cdofs1);
338 std::span dmap0 = cells0[0] >= 0 ? std::span(&dmap(cells0[0], 0), dmap_size)
339 : std::span<const std::int32_t>();
340 std::span dmap1 = cells0[1] >= 0 ? std::span(&dmap(cells0[1], 0), dmap_size)
341 : std::span<const std::int32_t>();
344 std::ranges::fill(be_b, T(0));
345 std::array perm = perms.empty()
346 ? std::array<std::uint8_t, 2>{0, 0}
347 : std::array{perms(cells[0], local_facet[0]),
348 perms(cells[1], local_facet[1])};
349 kernel(be_b.data(), coeffs_data + f * cstride, constants.data(),
350 cdofs_b.data(), local_facet.data(), perm.data(),
nullptr);
352 if (p0_set and cells0[0] >= 0)
353 P0(std::span<T>(be_b), cell_info0, cells0[0], 1);
354 if (p0_set and cells0[1] >= 0)
356 std::span sub_be(be_b.data() + bs * dmap_size, bs * dmap_size);
357 P0(sub_be, cell_info0, cells0[1], 1);
361 for (std::size_t i = 0; i < dmap0.size(); ++i)
363 std::int32_t dof = bs * dmap0[i];
364 std::int32_t offset = bs * i;
365 for (
int k = 0; k < bs; ++k)
366 b[dof + k] += be_b[offset + k];
368 for (std::size_t i = 0; i < dmap1.size(); ++i)
370 std::int32_t dof = bs * dmap1[i];
371 std::int32_t offset = bs * (i + dmap_size);
372 for (
int k = 0; k < bs; ++k)
373 b[dof + k] += be_b[offset + k];
398template <dolfinx::scalar T, std::
floating_po
int U,
typename V>
399 requires AssemblyVector<V, T>
400void lift_bc(V&& b,
const Form<T, U>& a,
auto bs0,
auto bs1,
401 std::span<const T> constants,
402 const std::map<std::pair<IntegralType, int>,
403 std::pair<std::span<const T>,
int>>& coefficients,
404 std::span<const T> bc_values1,
405 std::span<const std::int8_t> bc_markers1, std::span<const T> x0,
411 assert(bs0 == a.function_spaces()[0]->dofmaps().front()->bs());
412 assert(bs1 == a.function_spaces()[1]->dofmaps().front()->bs());
414 auto lifting_fn = [bs0, bs1, alpha, &b, &bc_values1, &bc_markers1,
415 &x0](
auto rows,
auto cols,
auto Ae)
417 const std::size_t nc = cols.size() * bs1;
418 for (std::size_t i = 0; i < cols.size(); ++i)
420 for (
int k = 0; k < bs1; ++k)
422 const std::int32_t ii = cols[i] * bs1 + k;
425 const T x_bc = bc_values1[ii];
426 const T _x0 = x0.empty() ? 0 : x0[ii];
427 for (std::size_t j = 0; j < rows.size(); ++j)
429 for (
int m = 0; m < bs0; ++m)
431 const std::int32_t jj = rows[j] * bs0 + m;
432 b[jj] -= Ae[(j * bs0 + m) * nc + (i * bs1 + k)] * alpha
444 std::shared_ptr<const mesh::Mesh<U>> mesh = a.mesh();
446 std::span x = mesh->geometry().x();
447 md::mdspan<const U, md::extents<std::size_t, md::dynamic_extent, 3>> _x(
448 x.data(), x.size() / 3, 3);
449 impl::assemble_matrix<true>(lifting_fn, a, _x, constants, coefficients, {},
461template <
typename V, std::floating_point U,
462 dolfinx::scalar T =
typename std::remove_cvref_t<V>::value_type>
463 requires AssemblyVector<V, T>
465 V&& b,
const Form<T, U>& L,
466 md::mdspan<
const U, md::extents<std::size_t, md::dynamic_extent, 3>> x,
467 std::span<const T> constants,
468 const std::map<std::pair<IntegralType, int>,
469 std::pair<std::span<const T>,
int>>& coefficients)
472 std::shared_ptr<const mesh::Mesh<U>> mesh = L.mesh();
476 auto mesh0 = L.function_spaces().at(0)->mesh();
479 const int num_cell_types = mesh->topology()->cell_types().size();
480 for (
int cell_type_idx = 0; cell_type_idx < num_cell_types; ++cell_type_idx)
483 mdspan2_t x_dofmap = mesh->geometry().dofmaps().at(cell_type_idx);
484 GeometryPack geometry{x_dofmap, x};
487 assert(L.function_spaces().at(0));
488 auto element = L.function_spaces().at(0)->elements(cell_type_idx);
490 std::shared_ptr<const fem::DofMap> dofmap
491 = L.function_spaces().at(0)->dofmaps().at(cell_type_idx);
493 auto dofs = dofmap->map();
494 const int bs = dofmap->bs();
500 std::vector<T> be_buffer(2 * bs * dofs.extent(1));
501 std::vector<U> cdofs_buffer(2 * 3 * x_dofmap.extent(1));
502 std::span be_b(be_buffer);
503 std::span cdofs_b(cdofs_buffer);
504 std::span be_b1 = be_b.first(bs * dofs.extent(1));
505 std::span cdofs_b1 = cdofs_b.first(3 * x_dofmap.extent(1));
507 const fem::DofTransformKernel<T>
auto& P0
510 std::span<const std::uint32_t> cell_info0;
511 if (element->needs_dof_transformations())
513 mesh0->topology_mutable()->create_cell_permutations();
514 cell_info0 = std::span(mesh0->topology()->get_cell_permutation_info());
524 assert(
cells.size() * cstride == coeffs.size());
527 [&b, &geometry, &cells, &dofs, &cells0, &P0, &cell_info0, &fn,
528 &constants, &coeffs, cstride, &be_b1, &cdofs_b1](
auto bs)
530 impl::assemble_cells_vector(
532 FormArgument{DofMapPack{dofs, bs, cells0}, P0, cell_info0}, fn,
533 constants, md::mdspan(coeffs.data(),
cells.size(), cstride),
538 md::mdspan<const std::uint8_t, md::dextents<std::size_t, 2>> facet_perms;
539 if (L.needs_facet_permutations())
541 facet_perms = impl::entity_permutations(
543 mesh->topology()->cell_types()[0]);
547 = md::mdspan<
const std::int32_t,
548 md::extents<std::size_t, md::dynamic_extent, 2>>;
550 = md::mdspan<
const std::int32_t,
551 md::extents<std::size_t, md::dynamic_extent, 2, 2>>;
553 = md::mdspan<
const T, md::extents<std::size_t, md::dynamic_extent, 2,
554 md::dynamic_extent>>;
560 auto& [coeffs, cstride]
564 assert((facets.size() / 4) * 2 * cstride == coeffs.size());
566 mdspanx22_t facets_mdspan(facets.data(), facets.size() / 4, 2, 2);
567 mdspanx22_t facets1_mdspan(facets1.data(), facets1.size() / 4, 2, 2);
570 [&b, &geometry, &facets_mdspan, &dofs, &facets1_mdspan, &P0,
571 &cell_info0, &fn, &constants, &coeffs, &facets, cstride,
572 &facet_perms, &be_b, &cdofs_b](
auto bs)
574 impl::assemble_interior_facets_vector(
575 b, geometry, facets_mdspan,
576 FormArgument{DofMapPack{dofs, bs, facets1_mdspan}, P0,
579 mdspanx2x_t(coeffs.data(), facets.size() / 4, 2, cstride),
580 facet_perms, be_b, cdofs_b);
587 const int num_itg = L.num_integrals(itg_type, 0);
594 md::mdspan<const std::uint8_t, md::dextents<std::size_t, 2>> perms;
595 if (L.needs_facet_permutations())
597 perms = impl::entity_permutations(*mesh->topology_mutable(), itg_type,
598 mesh->topology()->cell_types()[0]);
601 for (
int i = 0; i < num_itg; ++i)
603 auto fn = L.kernel(itg_type, i, 0);
605 auto& [coeffs, cstride] = coefficients.at({itg_type, i});
606 std::span e = L.domain(itg_type, i, 0);
607 mdspanx2_t entities(e.data(), e.size() / 2, 2);
608 std::span e1 = L.domain_arg(itg_type, 0, i, 0);
609 mdspanx2_t entities1(e1.data(), e1.size() / 2, 2);
610 assert((entities.size() / 2) * cstride == coeffs.size());
613 [&b, &geometry, &entities, &dofs, &entities1, &P0, &cell_info0, &fn,
614 &constants, &coeffs, cstride, &perms, &be_b1, &cdofs_b1](
auto bs)
616 impl::assemble_entities_vector(
617 b, geometry, entities,
618 FormArgument{DofMapPack{dofs, bs, entities1}, P0, cell_info0},
620 md::mdspan(coeffs.data(), entities.extent(0), cstride), perms,
634template <
typename V, std::floating_point U,
635 dolfinx::scalar T =
typename std::remove_cvref_t<V>::value_type>
636 requires AssemblyVector<V, T>
638 V&& b,
const Form<T, U>& L, std::span<const T> constants,
639 const std::map<std::pair<IntegralType, int>,
640 std::pair<std::span<const T>,
int>>& coefficients)
643 = md::mdspan<const U, md::extents<std::size_t, md::dynamic_extent, 3>>;
645 std::shared_ptr<const mesh::Mesh<U>> mesh = L.mesh();
647 auto x = mesh->geometry().x();
648 impl::assemble_vector(b, L, mdspanx3_t(x.data(), x.size() / 3, 3), constants,
Degree-of-freedom map representations and tools.
Definition DirichletBC.h:259
void cells(la::SparsityPattern &pattern, const std::pair< R0, R1 > &cells, std::array< std::reference_wrapper< const DofMap >, 2 > dofmaps)
Iterate over cells and insert entries into sparsity pattern.
Definition sparsitybuild.h:37
Finite element method functionality.
Definition assemble_expression_impl.h:22
@ standard
Standard.
Definition FiniteElement.h:31
@ vertex
Vertex.
Definition Form.h:47
@ interior_facet
Interior facet.
Definition Form.h:46
@ ridge
Ridge.
Definition Form.h:48
@ cell
Cell.
Definition Form.h:44
@ exterior_facet
Exterior facet.
Definition Form.h:45
constexpr bool is_transform_set(const F &fn)
Whether a DofTransformKernel fn should be invoked.
Definition traits.h:34