11#include "FunctionSpace.h"
15#include <dolfinx/la/utils.h>
16#include <dolfinx/mesh/Geometry.h>
17#include <dolfinx/mesh/Mesh.h>
18#include <dolfinx/mesh/Topology.h>
25namespace dolfinx::fem::impl
27bool has_bc(
auto& dofs,
auto& bc,
auto bs)
30 for (
int k = 0; k < bs; ++k)
37using mdspan2_t = md::mdspan<const std::int32_t, md::dextents<std::size_t, 2>>;
92template <
bool LiftingMode, dolfinx::scalar T, std::
floating_po
int U>
93void assemble_cells_matrix(
94 la::MatSet<T>
auto mat_set, mdspan2_t x_dofmap,
95 md::mdspan<
const U, md::extents<std::size_t, md::dynamic_extent, 3>> x,
96 std::span<const std::int32_t> cells,
97 std::tuple<mdspan2_t,
int, std::span<const std::int32_t>> dofmap0,
98 const fem::DofTransformKernel<T>
auto& P0,
99 std::tuple<mdspan2_t,
int, std::span<const std::int32_t>> dofmap1,
100 const fem::DofTransformKernel<T>
auto& P1T,
101 std::span<const std::int8_t> bc0, std::span<const std::int8_t> bc1,
102 const FEkernel<T, U>
auto& kernel,
103 md::mdspan<
const T, md::dextents<std::size_t, 2>> coeffs,
104 std::span<const T> constants, std::span<const std::uint32_t> cell_info0,
105 std::span<const std::uint32_t> cell_info1, std::span<T> Ab,
106 std::span<U> cdofs_b)
111 const auto [dmap0, bs0, cells0] = dofmap0;
112 const auto [dmap1, bs1, cells1] = dofmap1;
115 std::size_t num_dofs0 = dmap0.extent(1);
116 std::size_t num_dofs1 = dmap1.extent(1);
117 std::size_t ndim0 = bs0 * num_dofs0;
118 std::size_t ndim1 = bs1 * num_dofs1;
120 assert(Ab.size() >= ndim0 * ndim1);
121 assert(cdofs_b.size() >= 3 * x_dofmap.extent(1));
122 auto Ae = Ab.first(ndim0 * ndim1);
125 assert(cells0.size() ==
cells.size());
126 assert(cells1.size() ==
cells.size());
127 for (std::size_t c = 0; c <
cells.size(); ++c)
132 std::int32_t cell0 = cells0[c];
133 std::int32_t cell1 = cells1[c];
135 std::span dofs0(dmap0.data_handle() + cell0 * num_dofs0, num_dofs0);
136 std::span dofs1(dmap1.data_handle() + cell1 * num_dofs1, num_dofs1);
139 if constexpr (LiftingMode)
141 if (!has_bc(dofs1, bc1, bs1))
146 auto x_dofs = md::submdspan(x_dofmap,
cell, md::full_extent);
147 for (std::size_t i = 0; i < x_dofs.size(); ++i)
148 std::copy_n(&x(x_dofs[i], 0), 3, std::next(cdofs_b.begin(), 3 * i));
151 std::ranges::fill(Ae, 0);
152 kernel(Ae.data(), &coeffs(c, 0), constants.data(), cdofs_b.data(),
nullptr,
156 P0(Ae, cell_info0, cell0, ndim1);
157 P1T(Ae, cell_info1, cell1, ndim0);
161 if constexpr (!LiftingMode)
166 for (std::size_t i = 0; i < num_dofs0; ++i)
168 for (
int k = 0; k < bs0; ++k)
170 if (bc0[bs0 * dofs0[i] + k])
173 const int row = bs0 * i + k;
174 std::fill_n(std::next(Ae.begin(), ndim1 * row), ndim1, 0);
182 for (std::size_t j = 0; j < num_dofs1; ++j)
184 for (
int k = 0; k < bs1; ++k)
186 if (bc1[bs1 * dofs1[j] + k])
189 int col = bs1 * j + k;
190 for (std::size_t row = 0; row < ndim0; ++row)
191 Ae[row * ndim1 + col] = 0;
198 mat_set(dofs0, dofs1, Ae);
264template <
bool LiftingMode, dolfinx::scalar T, std::
floating_po
int U>
265void assemble_entities(
266 la::MatSet<T>
auto mat_set, mdspan2_t x_dofmap,
267 md::mdspan<
const U, md::extents<std::size_t, md::dynamic_extent, 3>> x,
268 md::mdspan<
const std::int32_t,
269 std::extents<std::size_t, md::dynamic_extent, 2>>
271 std::tuple<mdspan2_t,
int,
272 md::mdspan<
const std::int32_t,
273 std::extents<std::size_t, md::dynamic_extent, 2>>>
275 const fem::DofTransformKernel<T>
auto& P0,
276 std::tuple<mdspan2_t,
int,
277 md::mdspan<
const std::int32_t,
278 std::extents<std::size_t, md::dynamic_extent, 2>>>
280 const fem::DofTransformKernel<T>
auto& P1T,
281 std::span<const std::int8_t> bc0, std::span<const std::int8_t> bc1,
282 const FEkernel<T, U>
auto& kernel,
283 md::mdspan<
const T, md::dextents<std::size_t, 2>> coeffs,
284 std::span<const T> constants, std::span<const std::uint32_t> cell_info0,
285 std::span<const std::uint32_t> cell_info1,
286 md::mdspan<
const std::uint8_t, md::dextents<std::size_t, 2>> perms,
287 std::span<T> Ab, std::span<U> cdofs_b)
289 if (entities.empty())
292 const auto [dmap0, bs0, entities0] = dofmap0;
293 const auto [dmap1, bs1, entities1] = dofmap1;
295 std::size_t num_dofs0 = dmap0.extent(1);
296 std::size_t num_dofs1 = dmap1.extent(1);
297 std::size_t ndim0 = bs0 * num_dofs0;
298 std::size_t ndim1 = bs1 * num_dofs1;
299 assert(entities0.size() == entities.size());
300 assert(entities1.size() == entities.size());
301 assert(Ab.size() >= ndim0 * ndim1);
302 assert(cdofs_b.size() >= 3 * x_dofmap.extent(1));
303 auto Ae = Ab.first(ndim0 * ndim1);
304 for (std::size_t f = 0; f < entities.extent(0); ++f)
309 std::int32_t
cell = entities(f, 0);
310 std::int32_t local_entity = entities(f, 1);
311 std::int32_t cell0 = entities0(f, 0);
312 std::int32_t cell1 = entities1(f, 0);
314 std::span dofs0(dmap0.data_handle() + cell0 * num_dofs0, num_dofs0);
315 std::span dofs1(dmap1.data_handle() + cell1 * num_dofs1, num_dofs1);
318 if constexpr (LiftingMode)
320 if (!has_bc(dofs1, bc1, bs1))
325 auto x_dofs = md::submdspan(x_dofmap,
cell, md::full_extent);
326 for (std::size_t i = 0; i < x_dofs.size(); ++i)
327 std::copy_n(&x(x_dofs[i], 0), 3, std::next(cdofs_b.begin(), 3 * i));
330 std::uint8_t perm = perms.empty() ? 0 : perms(
cell, local_entity);
333 std::ranges::fill(Ae, 0);
334 kernel(Ae.data(), &coeffs(f, 0), constants.data(), cdofs_b.data(),
335 &local_entity, &perm,
nullptr);
336 P0(Ae, cell_info0, cell0, ndim1);
337 P1T(Ae, cell_info1, cell1, ndim0);
340 if constexpr (!LiftingMode)
345 for (std::size_t i = 0; i < num_dofs0; ++i)
347 for (
int k = 0; k < bs0; ++k)
349 if (bc0[bs0 * dofs0[i] + k])
352 const int row = bs0 * i + k;
353 std::fill_n(std::next(Ae.begin(), ndim1 * row), ndim1, 0);
361 for (std::size_t j = 0; j < num_dofs1; ++j)
363 for (
int k = 0; k < bs1; ++k)
365 if (bc1[bs1 * dofs1[j] + k])
368 int col = bs1 * j + k;
369 for (std::size_t row = 0; row < ndim0; ++row)
370 Ae[row * ndim1 + col] = 0;
377 mat_set(dofs0, dofs1, Ae);
442template <
bool LiftingMode, dolfinx::scalar T, std::
floating_po
int U>
443void assemble_interior_facets(
444 la::MatSet<T>
auto mat_set, mdspan2_t x_dofmap,
445 md::mdspan<
const U, md::extents<std::size_t, md::dynamic_extent, 3>> x,
446 md::mdspan<
const std::int32_t,
447 std::extents<std::size_t, md::dynamic_extent, 2, 2>>
449 std::tuple<
const DofMap&,
int,
450 md::mdspan<
const std::int32_t,
451 std::extents<std::size_t, md::dynamic_extent, 2, 2>>>
453 const fem::DofTransformKernel<T>
auto& P0,
454 std::tuple<
const DofMap&,
int,
455 md::mdspan<
const std::int32_t,
456 std::extents<std::size_t, md::dynamic_extent, 2, 2>>>
458 const fem::DofTransformKernel<T>
auto& P1T,
459 std::span<const std::int8_t> bc0, std::span<const std::int8_t> bc1,
460 const FEkernel<T, U>
auto& kernel,
461 md::mdspan<
const T, md::extents<std::size_t, md::dynamic_extent, 2,
464 std::span<const T> constants, std::span<const std::uint32_t> cell_info0,
465 std::span<const std::uint32_t> cell_info1,
466 md::mdspan<
const std::uint8_t, md::dextents<std::size_t, 2>> perms,
467 std::span<T> Ab, std::span<U> cdofs_b, std::span<std::int32_t> dofs_b,
468 std::span<T> Ae_block_b)
473 const auto [dmap0, bs0, facets0] = dofmap0;
474 const auto [dmap1, bs1, facets1] = dofmap1;
477 assert(cdofs_b.size() >= 2 * 3 * x_dofmap.extent(1));
478 auto cdofs0 = cdofs_b.first(3 * x_dofmap.extent(1));
479 auto cdofs1 = cdofs_b.last(3 * x_dofmap.extent(1));
481 std::size_t dmap0_size = dmap0.map().extent(1);
482 std::size_t dmap1_size = dmap1.map().extent(1);
483 std::size_t num_rows = bs0 * 2 * dmap0_size;
484 std::size_t num_cols = bs1 * 2 * dmap1_size;
487 assert(dofs_b.size() >= (2 * dmap0_size) + (2 * dmap1_size));
488 auto dmapjoint0 = dofs_b.first(2 * dmap0_size);
489 auto dmapjoint1 = dofs_b.last(2 * dmap1_size);
491 assert(facets0.size() == facets.size());
492 assert(facets1.size() == facets.size());
493 assert(Ab.size() >= num_rows * num_cols);
494 auto Ae = Ab.first(num_rows * num_cols);
502 assert(Ae_block_b.size() >= dmap0_size * bs0 * dmap1_size * bs1);
503 auto insert_block = [&Ae_block_b, &Ae, &bs0, &bs1, &num_cols,
504 &mat_set](std::span<const std::int32_t> rdofs,
505 std::span<const std::int32_t> cdofs,
506 std::size_t row_offset, std::size_t col_offset)
508 if (rdofs.empty() or cdofs.empty())
510 auto Ae_block = Ae_block_b.first(rdofs.size() * bs0 * cdofs.size() * bs1);
511 for (std::size_t i = 0; i < rdofs.size() * bs0; ++i)
514 = std::next(Ae.begin(), (row_offset + i) * num_cols + col_offset);
515 std::copy_n(row, cdofs.size() * bs1,
516 std::next(Ae_block.begin(), i * cdofs.size() * bs1));
518 mat_set(rdofs, cdofs, Ae_block);
521 for (std::size_t f = 0; f < facets.extent(0); ++f)
525 std::array
cells{facets(f, 0, 0), facets(f, 1, 0)};
526 std::array cells0{facets0(f, 0, 0), facets0(f, 1, 0)};
527 std::array cells1{facets1(f, 0, 0), facets1(f, 1, 0)};
530 std::array local_facet{facets(f, 0, 1), facets(f, 1, 1)};
533 auto x_dofs0 = md::submdspan(x_dofmap, cells[0], md::full_extent);
534 for (std::size_t i = 0; i < x_dofs0.size(); ++i)
535 std::copy_n(&x(x_dofs0[i], 0), 3, std::next(cdofs0.begin(), 3 * i));
536 auto x_dofs1 = md::submdspan(x_dofmap, cells[1], md::full_extent);
537 for (std::size_t i = 0; i < x_dofs1.size(); ++i)
538 std::copy_n(&x(x_dofs1[i], 0), 3, std::next(cdofs1.begin(), 3 * i));
544 std::span<const std::int32_t> dmap0_cell0
545 = cells0[0] >= 0 ? dmap0.cell_dofs(cells0[0])
546 : std::span<const std::int32_t>();
547 std::span<const std::int32_t> dmap0_cell1
548 = cells0[1] >= 0 ? dmap0.cell_dofs(cells0[1])
549 : std::span<const std::int32_t>();
551 std::ranges::copy(dmap0_cell0, dmapjoint0.begin());
552 std::ranges::copy(dmap0_cell1, std::next(dmapjoint0.begin(), dmap0_size));
555 std::span<const std::int32_t> dmap1_cell0
556 = cells1[0] >= 0 ? dmap1.cell_dofs(cells1[0])
557 : std::span<const std::int32_t>();
558 std::span<const std::int32_t> dmap1_cell1
559 = cells1[1] >= 0 ? dmap1.cell_dofs(cells1[1])
560 : std::span<const std::int32_t>();
562 std::ranges::copy(dmap1_cell0, dmapjoint1.begin());
563 std::ranges::copy(dmap1_cell1, std::next(dmapjoint1.begin(), dmap1_size));
566 if constexpr (LiftingMode)
568 if (!has_bc(dmapjoint1, bc1, bs1))
573 std::ranges::fill(Ae, 0);
574 std::array perm = perms.empty()
575 ? std::array<std::uint8_t, 2>{0, 0}
576 : std::array{perms(cells[0], local_facet[0]),
577 perms(cells[1], local_facet[1])};
578 kernel(Ae.data(), &coeffs(f, 0, 0), constants.data(), cdofs_b.data(),
579 local_facet.data(), perm.data(),
nullptr);
590 P0(Ae, cell_info0, cells0[0], num_cols);
593 std::span sub_Ae0(Ae.data() + bs0 * dmap0_size * num_cols,
594 bs0 * dmap0_size * num_cols);
596 P0(sub_Ae0, cell_info0, cells0[1], num_cols);
599 P1T(Ae, cell_info1, cells1[0], num_rows);
603 for (std::size_t row = 0; row < num_rows; ++row)
607 std::span sub_Ae1(Ae.data() + row * num_cols + bs1 * dmap1_size,
609 P1T(sub_Ae1, cell_info1, cells1[1], 1);
614 if constexpr (!LiftingMode)
619 for (std::size_t i = 0; i < dmapjoint0.size(); ++i)
621 for (
int k = 0; k < bs0; ++k)
623 if (bc0[bs0 * dmapjoint0[i] + k])
626 std::fill_n(std::next(Ae.begin(), num_cols * (bs0 * i + k)),
635 for (std::size_t j = 0; j < dmapjoint1.size(); ++j)
637 for (
int k = 0; k < bs1; ++k)
639 if (bc1[bs1 * dmapjoint1[j] + k])
642 for (std::size_t m = 0; m < num_rows; ++m)
643 Ae[m * num_cols + bs1 * j + k] = 0;
656 if (cells0[0] >= 0 and cells0[1] >= 0 and cells1[0] >= 0 and cells1[1] >= 0)
657 mat_set(dmapjoint0, dmapjoint1, Ae);
660 insert_block(dmap0_cell0, dmap1_cell0, 0, 0);
661 insert_block(dmap0_cell0, dmap1_cell1, 0, bs1 * dmap1_size);
662 insert_block(dmap0_cell1, dmap1_cell0, bs0 * dmap0_size, 0);
663 insert_block(dmap0_cell1, dmap1_cell1, bs0 * dmap0_size,
697template <
bool LiftingMode, dolfinx::scalar T, std::
floating_po
int U>
699 la::MatSet<T>
auto mat_set,
const Form<T, U>& a,
700 md::mdspan<
const U, md::extents<std::size_t, md::dynamic_extent, 3>> x,
701 std::span<const T> constants,
702 const std::map<std::pair<IntegralType, int>,
703 std::pair<std::span<const T>,
int>>& coefficients,
704 std::span<const std::int8_t> bc0, std::span<const std::int8_t> bc1)
707 std::shared_ptr<const mesh::Mesh<U>> mesh = a.mesh();
711 auto mesh0 = a.function_spaces().at(0)->mesh();
715 auto mesh1 = a.function_spaces().at(1)->mesh();
724 const int num_cell_types = mesh->topology()->cell_types().size();
725 for (
int cell_type_idx = 0; cell_type_idx < num_cell_types; ++cell_type_idx)
728 mdspan2_t x_dofmap = mesh->geometry().dofmaps().at(cell_type_idx);
731 std::shared_ptr<const fem::DofMap> dofmap0
732 = a.function_spaces().at(0)->dofmaps().at(cell_type_idx);
733 std::shared_ptr<const fem::DofMap> dofmap1
734 = a.function_spaces().at(1)->dofmaps().at(cell_type_idx);
737 md::mdspan<const std::int32_t, md::dextents<std::size_t, 2>> dofs0
739 const int bs0 = dofmap0->bs();
740 md::mdspan<const std::int32_t, md::dextents<std::size_t, 2>> dofs1
742 const int bs1 = dofmap1->bs();
746 std::vector<T> Ab((2 * bs0 * dofs0.extent(1))
747 * (2 * bs1 * dofs1.extent(1)));
748 std::vector<U> cdofs_b(2 * 3 * x_dofmap.extent(1));
749 std::size_t dmap0_size = dofmap0->map().extent(1);
750 std::size_t dmap1_size = dofmap1->map().extent(1);
751 std::vector<std::int32_t> dmap_b((2 * dmap0_size) + (2 * dmap1_size));
752 std::vector<T> Ae_block_b(dmap0_size * bs0 * dmap1_size * bs1);
754 auto element0 = a.function_spaces().at(0)->elements(cell_type_idx);
756 auto element1 = a.function_spaces().at(1)->elements(cell_type_idx);
758 const fem::DofTransformKernel<T>
auto& P0
760 const fem::DofTransformKernel<T>
auto& P1T
761 = element1->template dof_transformation_right_fn<T>(
764 std::span<const std::uint32_t> cell_info0;
765 std::span<const std::uint32_t> cell_info1;
766 if (element0->needs_dof_transformations()
767 or element1->needs_dof_transformations()
768 or a.needs_facet_permutations())
770 mesh0->topology_mutable()->create_entity_permutations();
771 mesh1->topology_mutable()->create_entity_permutations();
772 cell_info0 = std::span(mesh0->topology()->get_cell_permutation_info());
773 cell_info1 = std::span(mesh1->topology()->get_cell_permutation_info());
784 assert(
cells.size() * cstride == coeffs.size());
785 impl::assemble_cells_matrix<LiftingMode>(
786 mat_set, x_dofmap, x, cells, {dofs0, bs0, cells0}, P0,
787 {dofs1, bs1, cells1}, P1T, bc0, bc1, fn,
788 md::mdspan(coeffs.data(),
cells.size(), cstride), constants,
789 cell_info0, cell_info1, std::span(Ab), std::span(cdofs_b));
792 md::mdspan<const std::uint8_t, md::dextents<std::size_t, 2>> facet_perms;
793 if (a.needs_facet_permutations())
795 mesh::CellType cell_type = mesh->topology()->cell_types()[cell_type_idx];
796 int num_facets_per_cell
798 mesh->topology_mutable()->create_entity_permutations();
799 const std::vector<std::uint8_t>& p
800 = mesh->topology()->get_facet_permutations();
801 facet_perms = md::mdspan(p.data(), p.size() / num_facets_per_cell,
802 num_facets_per_cell);
808 if (num_cell_types > 1)
810 throw std::runtime_error(
"Interior facet integrals with mixed "
811 "topology aren't supported yet");
815 = md::mdspan<
const std::int32_t,
816 md::extents<std::size_t, md::dynamic_extent, 2, 2>>;
818 = md::mdspan<
const T, md::extents<std::size_t, md::dynamic_extent, 2,
819 md::dynamic_extent>>;
823 auto& [coeffs, cstride]
829 assert((facets.size() / 4) * 2 * cstride == coeffs.size());
830 impl::assemble_interior_facets<LiftingMode>(
831 mat_set, x_dofmap, x,
832 mdspanx22_t(facets.data(), facets.size() / 4, 2, 2),
834 mdspanx22_t(facets0.data(), facets0.size() / 4, 2, 2)},
837 mdspanx22_t(facets1.data(), facets1.size() / 4, 2, 2)},
839 mdspanx2x_t(coeffs.data(), facets.size() / 4, 2, cstride), constants,
840 cell_info0, cell_info1, facet_perms, std::span(Ab),
841 std::span(cdofs_b), dmap_b, std::span(Ae_block_b));
847 md::mdspan<const std::uint8_t, md::dextents<std::size_t, 2>> perms
850 : md::mdspan<
const std::uint8_t,
851 md::dextents<std::size_t, 2>>{};
853 for (
int i = 0; i < a.num_integrals(itg_type, cell_type_idx); ++i)
855 if (num_cell_types > 1)
857 throw std::runtime_error(
"Exterior facet integrals with mixed "
858 "topology aren't supported yet");
862 = md::mdspan<
const std::int32_t,
863 md::extents<std::size_t, md::dynamic_extent, 2>>;
865 auto fn = a.kernel(itg_type, i, 0);
867 auto& [coeffs, cstride] = coefficients.at({itg_type, i});
869 std::span e = a.domain(itg_type, i, 0);
870 mdspanx2_t entities(e.data(), e.size() / 2, 2);
871 std::span e0 = a.domain_arg(itg_type, 0, i, 0);
872 mdspanx2_t entities0(e0.data(), e0.size() / 2, 2);
873 std::span e1 = a.domain_arg(itg_type, 1, i, 0);
874 mdspanx2_t entities1(e1.data(), e1.size() / 2, 2);
875 assert((entities.size() / 2) * cstride == coeffs.size());
876 impl::assemble_entities<LiftingMode>(
877 mat_set, x_dofmap, x, entities, {dofs0, bs0, entities0}, P0,
878 {dofs1, bs1, entities1}, P1T, bc0, bc1, fn,
879 md::mdspan(coeffs.data(), entities.extent(0), cstride), constants,
880 cell_info0, cell_info1, perms, std::span(Ab), std::span(cdofs_b));
Degree-of-freedom map representations and tools.
Functions supporting finite element method operations.
void cells(la::SparsityPattern &pattern, const std::pair< R0, R1 > &cells, std::array< std::reference_wrapper< const DofMap >, 2 > dofmaps)
Iterate over cells and insert entries into sparsity pattern.
Definition sparsitybuild.h:37
@ transpose
Transpose.
Definition FiniteElement.h:28
@ standard
Standard.
Definition FiniteElement.h:27
@ vertex
Vertex.
Definition Form.h:45
@ interior_facet
Interior facet.
Definition Form.h:44
@ ridge
Ridge.
Definition Form.h:46
@ cell
Cell.
Definition Form.h:42
@ exterior_facet
Exterior facet.
Definition Form.h:43
CellType
Cell type identifier.
Definition cell_types.h:22
int cell_num_entities(CellType type, int dim)
Number of entities of dimension.
Definition cell_types.cpp:92